PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT25252
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family WRKY
Protein Properties Length: 375aa    MW: 40302.6 Da    PI: 5.9954
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT25252genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY23.11.4e-07117136221
               --SS-EEEEEEE--TT-SS- CS
      WRKY   2 dDgynWrKYGqKevkgsefp 21 
               +Dgy+W+KYGqK++k+ +f+
  EMT25252 117 KDGYKWKKYGQKNIKNRKFA 136
               7***************9986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.806.8E-19108198IPR003657WRKY domain
SuperFamilySSF1182901.7E-12112197IPR003657WRKY domain
SMARTSM007742.1E-19116198IPR003657WRKY domain
PfamPF031067.9E-15117197IPR003657WRKY domain
PROSITE profilePS5081110.097118180IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 375 aa     Download sequence    Send to blast
MAFQQEAVGK LWEELGHGYN LSAKLLALLS QPGHLLDSHG QEMAVAISQE LSQVFRASLS  60
MLNPGNSGRV VEGRATAPEA AIMEGSISQA TPAIISGEEV TPPRIGKEEE ITAEPYKDGY  120
KWKKYGQKNI KNRKFASGIF VSDLTVNKLS TNKRLYFRCM HSHERGCRAK KQVQQQDNSI  180
GNPPLYKVTC LNEHTCHQAF PNVNITNANL AATSTTTRNG ADYDPARGHL HVGGNGELED  240
RIMTSTFSTV IGGAALAAPS LSPVPSPPPV EASPSGPASY DTGGGQSPSL LDLSMCLDET  300
MMDEMYFSCG SPFPPVEANA APWSLSSLPP PPPPMEASSI DPAAYMPPRC GHSLSLDAMT  360
MAEIFLWSSP LFSPR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG6703060.0HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLM8CDQ80.0M8CDQ8_AEGTA; Putative WRKY transcription factor 70
STRINGMLOC_34506.10.0(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP132432632
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.12e-16WRKY DNA-binding protein 70